The detailed information of tRNA gene sequence


Sequence ID>SRA1006818
Genome IDSRR020488.219514
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 115
End posion on genome 42
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
gttgcgagta
tRNA gene sequence
GGGGCCATAGCTCAGTTGGTAGAGCACCTGCATGGCATGCGAGGGGGTCAGGGGTTCAAA
TCCCCTTGGCTCCAtgg
Downstream region at tRNA end position
attttatttg
Secondary structure (Cloverleaf model)
>SRA1006818	Ala	GGC
                   a      Atgg attttatttg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGGTC
                    C - G
                    C   A
                    T + G
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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