The detailed information of tRNA gene sequence


Sequence ID>SRA1006822
Genome IDSRR020488.220051
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 122
End posion on genome 196
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
caaatatcac
tRNA gene sequence
GCTCCCTTCGTCTATCGGTTAGGACGCAAGGTTTTCAACCTTGAAAGAGGGGTTCGATTC
CCCTAGGGAGCGCCA
Downstream region at tRNA end position
catctttttg
Secondary structure (Cloverleaf model)
>SRA1006822	Glu	TTC
                   c      GCCA catctttttg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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