The detailed information of tRNA gene sequence


Sequence ID>SRA1006830
Genome IDSRR020488.222953
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 271
End posion on genome 185
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gattgtcttg
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCAGCACTGGAAATGCTGTATAGGGGCAACCTTA
TCGAGGGTTCGAATCCCTCTCTCTCCGttt
Downstream region at tRNA end position 
catattagtt
Secondary structure (Cloverleaf model)
>SRA1006830	Ser	GGA
                   g      Gttt catattagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGGGCAACCTTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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