The detailed information of tRNA gene sequence


Sequence ID>SRA1006848
Genome IDSRR020488.230650
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 188
End posion on genome 112
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttcgcaacac
tRNA gene sequence
GGTTGTGTAGCTCAGCTGGTTAGAGCGCGGCATTCATAATGCCGAGGTCGGTGGTTCAAG
CCCACCCACAACCACCA
Downstream region at tRNA end position
ttagtattaa
Secondary structure (Cloverleaf model)
>SRA1006848	Met	CAT
                   c      ACCA ttagtattaa
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A
                     G - C          C G
                    T     C C A C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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