The detailed information of tRNA gene sequence


Sequence ID>SRA1006870
Genome IDSRR020488.242691
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 207
End posion on genome 131
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ccaccaaaat
tRNA gene sequence
GGGGGTGTAGCTCAATTGGTTAGAGCATCCGCCTGTCACGCGGAAGGCTGCGGGTTCGAG
TCCCGTCACTCCCGCCA
Downstream region at tRNA end position
tttaattgat
Secondary structure (Cloverleaf model)
>SRA1006870	Asp	GTC
                   t      GCCA tttaattgat
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGCT
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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