The detailed information of tRNA gene sequence


Sequence ID>SRA1006872
Genome IDSRR020488.244452
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 52
End posion on genome 141
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
ttgttcagat
tRNA gene sequence
GGAGAGGTGGCTGAGCGGTTGAAAGCACTGGTCTTGAAAACCAGCAACGGGGAAACTCGT
TCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position
gaagaaattt
Secondary structure (Cloverleaf model)
>SRA1006872	Ser	TGA
                   t      GCCA gaagaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAACGGGGAAACTCGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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