The detailed information of tRNA gene sequence


Sequence ID>SRA1006875
Genome IDSRR020488.244769
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 42
End posion on genome 117
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position
aatgattact
tRNA gene sequence
GCCACCGTAACTCAGTTGGTAGAGTAGTTCATTCGTAATGAACAAGTCGCTGGTTCGAAT
CCAGTCGGTGGCTCTA
Downstream region at tRNA end position
tactagtctt
Secondary structure (Cloverleaf model)
>SRA1006875	Thr	CGT
                   t      TCTA tactagtctt
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        A      + | | | |     G
    T       C T C A       G C T G G     C
    G       | | | |                 T T
    G       G A G T
      T A          A     AAGTC
                    G - C
                    T - A
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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