The detailed information of tRNA gene sequence


Sequence ID>SRA1006878
Genome IDSRR020488.245840
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 115
End posion on genome 39
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position
tgcgatattt
tRNA gene sequence
GTCCTCGTAGCTCAGTAGGATAGAGCGTGGGATTCCTAATCCTGAGGCCACAGGTTCGAT
TCCTGTCGAGGACACCA
Downstream region at tRNA end position
tctattatga
Secondary structure (Cloverleaf model)
>SRA1006878	Arg	CCT
                   t      ACCA tctattatga
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T G A        A      | | | | |     G
    A       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    T + G
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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