The detailed information of tRNA gene sequence


Sequence ID>SRA1006882
Genome IDSRR020488.248749
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 216
End posion on genome 127
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
atattttaat
tRNA gene sequence
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCTTGGAAAGCGTGTAAAGGAGCATTTCTT
TCATGGGTTCGAATCCCATTCTCTCCGCCA
Downstream region at tRNA end position
ttaaattggc
Secondary structure (Cloverleaf model)
>SRA1006882	Ser	GGA
                   t      GCCA ttaaattggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAAAGGAGCATTTCTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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