The detailed information of tRNA gene sequence


Sequence ID>SRA1006884
Genome IDSRR020488.252110
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 135
End posion on genome 62
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aaaaatataa
tRNA gene sequence 
GGGCATGTAGCTCAGTTGGATAGAGCATCAGATTCCGGTTCTGAGAGTCGGGGGTTCAAA
TCCCTCCATGCTCGtaa
Downstream region at tRNA end position 
tatattctta
Secondary structure (Cloverleaf model)
>SRA1006884	Arg	CCG
                   a      Gtaa tatattctta
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GAGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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