The detailed information of tRNA gene sequence


Sequence ID>SRA1006888
Genome IDSRR020488.254295
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 12
End posion on genome 87
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position
aattgtcttc
tRNA gene sequence
GCTCCCTTAGCTCAGTCGGCAGAGCGTCTCCATGGTAAGGAGAAGGTCGAGAGTTCAATT
CTCTCAGGGAGCTCAA
Downstream region at tRNA end position
atgtgcattg
Secondary structure (Cloverleaf model)
>SRA1006888	Thr	GGT
                   c      TCAA atgtgcattg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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