The detailed information of tRNA gene sequence


Sequence ID>SRA1006890
Genome IDSRR020488.254726
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 244
End posion on genome 169
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtgttcttnt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCACCTGCTTTGCACGCAGGGGGTCAGGAGTTCGAAT
CTCCTTAGCTCCACCA
Downstream region at tRNA end position 
tttagaggga
Secondary structure (Cloverleaf model)
>SRA1006890	Ala	TGC
                   t      ACCA tttagaggga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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