The detailed information of tRNA gene sequence


Sequence ID>SRA1006913
Genome IDSRR020488.261518
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 171
End posion on genome 245
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
cccggccttt
tRNA gene sequence
CGGGGTGTAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGGAGGTTCGAA
TCCTCTCGCCCCGACtt
Downstream region at tRNA end position
ggttagggag
Secondary structure (Cloverleaf model)
>SRA1006913	Pro	TGG
                   t      ACtt ggttagggag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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