The detailed information of tRNA gene sequence


Sequence ID>SRA1006942
Genome IDSRR020488.273442
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 15
End posion on genome 88
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
aatctagtat
tRNA gene sequence
GGCCACGTGGCGGAATGGTTACGCAGAGGATTGCAAATCCTTCTATCCCAGTTCGATTCT
GGGCGTGGCCTCCA
Downstream region at tRNA end position
tatattagaa
Secondary structure (Cloverleaf model)
>SRA1006942	Cys	GCA
                   t      TCCA tatattagaa
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     G G G T C     A
        A A        G      | | | | |     G
      T     G G C G       C C C A G     C
      G       | | |                 T T
      G     A C G C
        T T        A     CTAT
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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