The detailed information of tRNA gene sequence


Sequence ID>SRA1006948
Genome IDSRR020488.276818
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 267
End posion on genome 185
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
nnnnnnnttt
tRNA gene sequence
GCGGGTGTGGTGAAATTGGTAGACACGCTAGACTTAGGATCTAGTGCCTAACAGCATGGG
GGTTCGAGTCCCTTCACCCGCACtt
Downstream region at tRNA end position
ttttattttc
Secondary structure (Cloverleaf model)
>SRA1006948	Leu	TAG
                   t      ACtt ttttattttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       A G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCCTAACAGCAT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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