The detailed information of tRNA gene sequence


Sequence ID>SRA1006954
Genome IDSRR020488.279049
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 287
End posion on genome 200
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
gaatagcctc
tRNA gene sequence
TGGAGGGGTGGTCGAGTGGTTTAAGGCTCTAGTCTTGAAAACTAGCGTGTCTGCAAGGGC
ACCGTGGGTTCGAATCCCACCCCTCCGTact
Downstream region at tRNA end position
taattacttc
Secondary structure (Cloverleaf model)
>SRA1006954	Ser	TGA
                   c      Tact taattacttc
                     T + G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    G     C A C C C     A
    T G A G        T      | | | | |     G
  G         C T G G       G T G G G     C
  G           +   |                 T T
  T         A G G C
    T T A          T     CGTGTCTGCAAGGGCACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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