The detailed information of tRNA gene sequence


Sequence ID>SRA1006996
Genome IDSRR020488.291388
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 108
End posion on genome 34
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tagaaaaaat
tRNA gene sequence
GGCGGAGTAGCTCAGCTGGTTAGAGCATCGGAATCATAATCCGAGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACat
Downstream region at tRNA end position
tacaatttgt
Secondary structure (Cloverleaf model)
>SRA1006996	Met	CAT
                   t      ACat tacaatttgt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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