The detailed information of tRNA gene sequence


Sequence ID>SRA1007000
Genome IDSRR020488.293142
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 125
End posion on genome 200
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position
gggcctttgt
tRNA gene sequence
GGGGCCGTAGCTCAGTTGGGAGAGCGTCGCGTTCGCAATGCGAAGGTCAGGGGTTCGACT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position
aatatttcag
Secondary structure (Cloverleaf model)
>SRA1007000	Ala	CGC
                   t      ACCA aatatttcag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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