The detailed information of tRNA gene sequence


Sequence ID>SRA1007042
Genome IDSRR020488.308705
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 117
End posion on genome 40
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atttggaaaa
tRNA gene sequence 
GCTCCTGTAGTGTAGTCCGGCCCATCATTTCGGCTTCTCGAGCCGAGCACCCGGGTTCAA
ATCCCGGCGGGAGCACCA
Downstream region at tRNA end position 
aattatatcc
Secondary structure (Cloverleaf model)
>SRA1007042	Glu	CTC
                   a      ACCA aattatatcc
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       C C G G G     C
  G           | | +                 T T
  G         T C A T
    C C C A        T     GCAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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