The detailed information of tRNA gene sequence


Sequence ID>SRA1007049
Genome IDSRR020488.309845
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 93
End posion on genome 168
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
taacgctctt
tRNA gene sequence 
GGGGATATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGCAGTTCGATC
CTGCTTATCTCCACTA
Downstream region at tRNA end position 
cattacttta
Secondary structure (Cloverleaf model)
>SRA1007049	Ala	GGC
                   t      ACTA cattacttta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          C T
                    T     T C G T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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