The detailed information of tRNA gene sequence


Sequence ID>SRA1007060
Genome IDSRR020488.315354
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 238
End posion on genome 154
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
tttttattaa
tRNA gene sequence
GGAGAGGTGGCTGAGTGGTTGAAAGCGAACGATTCGAAATCGTTTGACAGGCAACTGTTC
GTGGGTTCGAATCCCACCCTCTCCGttt
Downstream region at tRNA end position
tcttagaatg
Secondary structure (Cloverleaf model)
>SRA1007060	Ser	CGA
                   a      Gttt tcttagaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TGACAGGCAACTGTTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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