The detailed information of tRNA gene sequence


Sequence ID>SRA1007071
Genome IDSRR020488.320462
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 226
End posion on genome 151
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
catttaattt
tRNA gene sequence
GGGGCTGTAGCTCAGCTGGGAGAGCAATTCCCTTGCACGGAATAGGTCGCAGGTTCGATC
CCTGTCAGCTCCACAA
Downstream region at tRNA end position
gaatttaaat
Secondary structure (Cloverleaf model)
>SRA1007071	Ala	TGC
                   t      ACAA gaatttaaat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T G T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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