The detailed information of tRNA gene sequence


Sequence ID>SRA1007077
Genome IDSRR020488.325079
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 198
End posion on genome 109
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
taattttttc
tRNA gene sequence
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCTTGGAAAGCGTGTAAACGGGAAACTGTT
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position
tcaaaaaagc
Secondary structure (Cloverleaf model)
>SRA1007077	Ser	GGA
                   c      GCCA tcaaaaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAAACGGGAAACTGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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