The detailed information of tRNA gene sequence


Sequence ID>SRA1007080
Genome IDSRR020488.326053
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 79
End posion on genome 9
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
aatcttcgct
tRNA gene sequence
GGCGGCATGGCCAAGTGGTAAGGCAGAGGATTGCAAATCCTTTATCCCCAGTTCGAATCT
GGGTGCCGCCTttt
Downstream region at tRNA end position
tcaatnnnnn
Secondary structure (Cloverleaf model)
>SRA1007080	Cys	GCA
                   t      Tttt tcaatnnnnn
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        G      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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