The detailed information of tRNA gene sequence


Sequence ID>SRA1007088
Genome IDSRR020488.328257
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 218
End posion on genome 142
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tcggttcttt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCGNACCCCTGATAAGGGTGAGGTCGCCGGTTCAAA
TCCAGCCAGACCCACCA
Downstream region at tRNA end position 
tttaggatgg
Secondary structure (Cloverleaf model)
>SRA1007088	Ile	GAT
                   t      ACCA tttaggatgg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | |   | |     A
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    N   G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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