The detailed information of tRNA gene sequence


Sequence ID>SRA1007163
Genome IDSRR020488.360504
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 231
End posion on genome 157
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cataacttac
tRNA gene sequence 
AGGCGCGTAGCTCAGCTTGGTTAGAGCGCCACCTTGACATGGTGGAGGTCGTTGGTTCGA
GTCCAATCGTGCCTAtat
Downstream region at tRNA end position 
tttatagagt
Secondary structure (Cloverleaf model)
>SRA1007163	Val	GAC
                   c      Atat tttatagagt
                     A - T
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T A A C C     A
    T C G A        A      + | | | |     G
  T         C T C G       G T T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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