The detailed information of tRNA gene sequence


Sequence ID>SRA1007170
Genome IDSRR020488.362086
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 254
End posion on genome 183
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position
aaaagatcga
tRNA gene sequence
TGGGCCGTCGCCAAGTGGTAAGGCANCGGGTTTTGGTCTCGACATTCCTAGGTTCGAATC
CTAGCGGCCCAGttc
Downstream region at tRNA end position
taatattcaa
Secondary structure (Cloverleaf model)
>SRA1007170	Gln	TTG
                   a      Gttc taatattcaa
                     T - A
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G A T C C     A
        G A        C      | | | | |     G
      T     A C C G       C T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    N   A
                    C - G
                    G - C
                    G + T
                    G - C
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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