The detailed information of tRNA gene sequence


Sequence ID>SRA1007175
Genome IDSRR020488.363345
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 264
End posion on genome 188
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
agtaaaacaa
tRNA gene sequence
GGCGGTGTAGCTCAGTTGGTTAGAGCAGGGGAATCATAATCCCAAGGTCGCAAGTTCAAA
TCTTGCCACCGCCACCA
Downstream region at tRNA end position
caaacccaca
Secondary structure (Cloverleaf model)
>SRA1007175	Met	CAT
                   a      ACCA caaacccaca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T T C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    G - C
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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