The detailed information of tRNA gene sequence


Sequence ID>SRA1007181
Genome IDSRR020488.365411
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ttttaaacga
tRNA gene sequence
GGGGGTGTAGCTCAGTTGGTTAGAGCGCTGGCCTGTCACGCCAGAGGTCGCGGGTTCGAG
TCCCGTCACTCCCGCCA
Downstream region at tRNA end position
ctaaaaattt
Secondary structure (Cloverleaf model)
>SRA1007181	Asp	GTC
                   a      GCCA ctaaaaattt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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