The detailed information of tRNA gene sequence


Sequence ID>SRA1007196
Genome IDSRR020488.372163
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 170
End posion on genome 245
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggaacttctt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCAACGCTGGCAGCGTTGAGGTCAGGGGTTCGATC
CCCCTTGGCTCCACCA
Downstream region at tRNA end position 
tccctaactt
Secondary structure (Cloverleaf model)
>SRA1007196	Ala	GGC
                   t      ACCA tccctaactt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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