The detailed information of tRNA gene sequence


Sequence ID>SRA1007224
Genome IDSRR020488.380418
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 170
End posion on genome 84
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
ataaacaggC
tRNA gene sequence
GGAGAGGTGGCTGAGTGGTCGAAAGCGAACGACTCGAAATCGTTTAATAGATAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGGat
Downstream region at tRNA end position
ttttttagtg
Secondary structure (Cloverleaf model)
>SRA1007224	Ser	CGA
                   C      GGat ttttttagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAATAGATAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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