The detailed information of tRNA gene sequence


Sequence ID>SRA1007240
Genome IDSRR020488.385259
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 119
End posion on genome 206
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
tgttttacgt
tRNA gene sequence
GGAGAGGTGTCCGAGCGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACCTAACGGTATC
GAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position
tactacgttt
Secondary structure (Cloverleaf model)
>SRA1007240	Ser	GGA
                   t      GCCA tactacgttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TATACCTAACGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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