The detailed information of tRNA gene sequence


Sequence ID>SRA1007250
Genome IDSRR020488.387536
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 30
End posion on genome 117
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
gttgaaatat
tRNA gene sequence
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCCTGGAAAGCGTGTAAACGTTTAGGCGTT
TCGAGGGTTCGAATCCCTCTCTCTCCACac
Downstream region at tRNA end position
ccttttgttc
Secondary structure (Cloverleaf model)
>SRA1007250	Ser	GGA
                   t      ACac ccttttgttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAAACGTTTAGGCGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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