The detailed information of tRNA gene sequence


Sequence ID>SRA1007257
Genome IDSRR020488.391081
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 211
End posion on genome 135
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
taatgccagg
tRNA gene sequence 
GGGCCGGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGCACGTTCGAG
TCGTGCTCGGCCCACCA
Downstream region at tRNA end position 
tttttcatgg
Secondary structure (Cloverleaf model)
>SRA1007257	Ile	GAT
                   g      ACCA tttttcatgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T G
                    T     C G T G C     A
      G G A        A      | | | | |     G
    T       C T C G       G C A C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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