The detailed information of tRNA gene sequence


Sequence ID>SRA1007286
Genome IDSRR020488.398708
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 10
End posion on genome 85
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
naattgtatt
tRNA gene sequence
GGGGCTGTAGCTCAGTTGGCAGAGCACGTGCATGGCATGCACGGGGTCAGGGGTTCAAAT
CCCCTCAGCTCCACAA
Downstream region at tRNA end position
acaaatatga
Secondary structure (Cloverleaf model)
>SRA1007286	Ala	GGC
                   t      ACAA acaaatatga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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