The detailed information of tRNA gene sequence


Sequence ID>SRA1007298
Genome IDSRR020488.403333
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 286
End posion on genome 215
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position
aaacaacctc
tRNA gene sequence
GCCGGTATAGCTCAGCGGAAGAGCAACTGTTTCGTAAACAGTAGGTCATTGGTTCAATTC
CAATTATCGGCAttt
Downstream region at tRNA end position
caaaagtaca
Secondary structure (Cloverleaf model)
>SRA1007298	Thr	CGT
                   c      Attt caaaagtaca
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A
                     A - T          T T
                    T     T A A C C     A
        G A        A      | | | | |     A
      C     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        A A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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