The detailed information of tRNA gene sequence


Sequence ID>SRA1007301
Genome IDSRR020488.404203
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 142
End posion on genome 212
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
aanctttttc
tRNA gene sequence
GGCGGCATGGCCAAGTGGTAAGGCAGAGGATTGCAAATCCTTTATCCCCAGTTCGAATCT
GGGTGCCGCCTtat
Downstream region at tRNA end position
taatttttta
Secondary structure (Cloverleaf model)
>SRA1007301	Cys	GCA
                   c      Ttat taatttttta
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        G      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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