The detailed information of tRNA gene sequence


Sequence ID>SRA1007339
Genome IDSRR020488.416052
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 249
End posion on genome 175
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
ctaatttccT
tRNA gene sequence
GGCCCCATCGTCTAGAGGCCTAGGACACCTCCCTTTCACGGAGGCGACAGGGGTTCGAAT
CCCCTTGGGGCTATta
Downstream region at tRNA end position
tttaaatttt
Secondary structure (Cloverleaf model)
>SRA1007339	Glu	TTC
                   T      ATta tttaaatttt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CGAC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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