The detailed information of tRNA gene sequence


Sequence ID>SRA1007343
Genome IDSRR020488.417219
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 103
End posion on genome 175
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
aaaatatcaa
tRNA gene sequence
GAGCCTGTGGCGCAACGGTTAGCGCGTCGGATTCCAGACCCGAAGGTTGGGGGTTCAAAT
CCCTCCAGGCTCAggg
Downstream region at tRNA end position
ccagtggtct
Secondary structure (Cloverleaf model)
>SRA1007343	Trp	CCA
                   a      Aggg ccagtggtct
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C A A        G      | + | | |     A
    G       C G C G       G G G G G     C
    G       | | | |                 T T
    T       G C G C
      T A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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