The detailed information of tRNA gene sequence


Sequence ID>SRA1007370
Genome IDSRR020488.424080
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 206
End posion on genome 281
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
tattgtattt
tRNA gene sequence
GCCCCTATAGCTCAATTGGTAGAGCAATTGATTTGTAATCAATAGGTTCGCGGTTCAAGT
CCGTGTGGGGGCACCA
Downstream region at tRNA end position
ttaattannn
Secondary structure (Cloverleaf model)
>SRA1007370	Thr	TGT
                   t      ACCA ttaattannn
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G T G C C     A
      T A A        A      | + | | |     A
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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