The detailed information of tRNA gene sequence


Sequence ID>SRA1007375
Genome IDSRR020488.425754
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 17
End posion on genome 93
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gctcatcttt
tRNA gene sequence
GGCGGGGTAGCTCAGTTGGTTAGAGCGGAGGAATCATAATCCTTAGGTCGGGGGTTCAAA
TCCCTCTCCCGCTACCA
Downstream region at tRNA end position
tcaaatttcc
Secondary structure (Cloverleaf model)
>SRA1007375	Met	CAT
                   t      ACCA tcaaatttcc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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