The detailed information of tRNA gene sequence


Sequence ID>SRA1007386
Genome IDSRR020488.429872
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 15
End posion on genome 92
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aattttattt
tRNA gene sequence
AGGCCTGTAGCTCAGTTGGTTAGAGCAGTACACTCATAATGTATTGGTCCCAGGTTCGAG
TCCTGGCGGGCCCCACC
Downstream region at tRNA end position
Agaaattaat
Secondary structure (Cloverleaf model)
>SRA1007386	Met	CAT
                   t      CACC Agaaattaat
                     A   C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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