The detailed information of tRNA gene sequence


Sequence ID>SRA1007400
Genome IDSRR020488.436291
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 111
End posion on genome 36
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ataagaatta
tRNA gene sequence
GGGGTGGTAGTTCAATTTGGTTAGAGCACCTGCCTGTCACGCAGGAAGTTGCGAGTTCGA
GTCTCGTCCATCCCGCat
Downstream region at tRNA end position
taaaaaagcc
Secondary structure (Cloverleaf model)
>SRA1007400	Asp	GTC
                   a      GCat taaaaaagcc
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C T C     A
    T T A A        A      + | | | |     G
  T         C T T G       G C G A G     C
  G         | | + |                 T T
  G         G A G C
    T T A          A     AAGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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