The detailed information of tRNA gene sequence


Sequence ID>SRA1007401
Genome IDSRR020488.436432
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 240
End posion on genome 163
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaaaaatttt
tRNA gene sequence 
CGGGGTGTAGCGTAGTCCGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGCAGGTTCAA
ATCCTGCCACCCCGACAA
Downstream region at tRNA end position 
aattttcatt
Secondary structure (Cloverleaf model)
>SRA1007401	Pro	TGG
                   t      ACAA aattttcatt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     A
  C         T G C G       G C A G G     C
  G         + | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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