The detailed information of tRNA gene sequence


Sequence ID>SRA1007415
Genome IDSRR020488.441569
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 151
End posion on genome 75
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
ctccacactt
tRNA gene sequence
CGGAGTGTGGCGCAGCCTGGTAGCGCACCTCGTTCGGGACGAGGGGGTCGCAGGTTCAAA
TCCTGCCACTCCGACCA
Downstream region at tRNA end position
gctctaaacc
Secondary structure (Cloverleaf model)
>SRA1007415	Pro	CGG
                   t      ACCA gctctaaacc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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