The detailed information of tRNA gene sequence


Sequence ID>SRA1007416
Genome IDSRR020488.441616
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 170
End posion on genome 245
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aacacgttgt
tRNA gene sequence 
GCCCTTGTAGCTCAGCTGGTAGAGCAATTGATTTGTAATCAATAGGTCCGCGGTTCGAAT
CCGTGCGGGGGCACCA
Downstream region at tRNA end position 
ctaaatactt
Secondary structure (Cloverleaf model)
>SRA1007416	Thr	TGT
                   t      ACCA ctaaatactt
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T + G
                     G - C          T A
                    T     G T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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