The detailed information of tRNA gene sequence


Sequence ID>SRA1007417
Genome IDSRR020488.441968
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 139
End posion on genome 62
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
ttttttttgg
tRNA gene sequence
GGAGACGTGCCTGAGCGGTCCAAAGGAACGGTTTGCAAAACCGTACAGTCACCGGTTCAA
ATCCGGTCGTCTCCTCCA
Downstream region at tRNA end position
tcaaaacgcc
Secondary structure (Cloverleaf model)
>SRA1007417	Cys	GCA
                   g      TCCA tcaaaacgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G G C C     A
      C G A        G      | | | | |     A
    G       G T C C       A C C G G     C
    G         | | |                 T T
    T       A A G G
      C C A        A     ACAGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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