The detailed information of tRNA gene sequence


Sequence ID>SRA1007418
Genome IDSRR020488.442217
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 101
End posion on genome 175
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
cctttgaagt
tRNA gene sequence
GGTCCGGTAGTTAAACGGCTATAATTCCGCCCTGTCACGGCGGCGTTCGGGGTTCGATTC
CCCGTCGGACCGCCA
Downstream region at tRNA end position
ttatgaaatg
Secondary structure (Cloverleaf model)
>SRA1007418	Asp	GTC
                   t      GCCA ttatgaaatg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G + T          T T
                    T     G C C C C     A
      C A A        A      | | | | |     G
    G       A T T G       C G G G G     C
    G       | | | +                 T T
    C       T A A T
      T A          T     CGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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