The detailed information of tRNA gene sequence


Sequence ID>SRA1007425
Genome IDSRR020488.444205
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 82
End posion on genome 158
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position
aaaaaaattg
tRNA gene sequence
CGGGGCATGGCGTAGCTTGGTAGCGCGTCCGGCTGGGGGCCGGGAGGTCGTAGGTTCAAA
TCCTGCTGCCCCGACCA
Downstream region at tRNA end position
tttaaggagg
Secondary structure (Cloverleaf model)
>SRA1007425	Pro	GGG
                   g      ACCA tttaaggagg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C G T C C     A
      C G A        G      | + | | |     A
    T       T G C G       G T A G G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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