The detailed information of tRNA gene sequence


Sequence ID>SRA1007431
Genome IDSRR020488.448178
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 194
End posion on genome 118
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tgtgcgtccc
tRNA gene sequence
GGGGCGGTAGCTCAGCCGGTCAGAGCAGAGGACTCATAATCCTTGGGTCGTGGGTTCGAG
CCCCACCCGCCCCACCA
Downstream region at tRNA end position
ctcacgccgt
Secondary structure (Cloverleaf model)
>SRA1007431	Met	CAT
                   c      ACCA ctcacgccgt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     C A C C C     A
      C G A        A      | | | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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